Genome Meta Information: Patescibacteria [C1 O1 F1 G1] bacterium HMT-871 P-B-F_MAG_00016 (GCA_013333755.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013333755.2 | ||
| HOMD Taxon-ID | HMT-0871 | ||
| Species Name (in use by HOMD) | Patescibacteria [C1 O1 F1 G1] bacterium HMT-871 | ||
| Organism Name (as deposited) | HMT-871 Patescibacteria [C1 O1 F1 G1] bacterium HMT-871 P-B-F_MAG_00016 | ||
| Strain or Isolate | P-B-F_MAG_00016 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__JAEDAM01;o__BD1-5;f__UBA6164;g__GN02-872; s__GN02-872 sp002761215 |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 50 | ||
| Contigs |
|
||
| Total Sequence Length | 1,010,868 (bp) | ||
| GC Percentage | 25.01 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/333/755/GCA_013333755.2_ASM1333375v2 | ||
| CDS | 1117 | ||
| Genes | 1147 | ||
| mRNA | 1147 | ||
| misc RNA | 1 | ||
| rRNA | 0 | ||
| tRNA | 29 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1333375v2 |
| GenBank Assembly Accession | GCA_013333755.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN14602641 [NCBI] |
| BioProject | PRJNA625082 [NCBI] |
| Submitter | Marine Biological Laboratory |
| Submission Date | 2020-04-15T15:40:04.936 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JABCOD02 |
| NCBI TaxID | 2044595 |
| Isolation Source | dental plaque |
| Geo Location | USA: Massachusetts |
