Genome Meta Information: Cupriavidus gilardii FDAARGOS_639 (GCA_013347325.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013347325.1 | ||
| HOMD Taxon-ID | HMT-0027 | ||
| Species Name (in use by HOMD) | Cupriavidus gilardii | ||
| Organism Name (as deposited) | HMT-027 Cupriavidus gilardii FDAARGOS_639 | ||
| Strain or Isolate | FDAARGOS_639 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus; s__Cupriavidus gilardii |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 656.77 | ||
| Contigs |
|
||
| Total Sequence Length | 5,760,010 (bp) | ||
| GC Percentage | 67.45 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/347/325/GCA_013347325.1_ASM1334732v1 | ||
| CDS | 5104 | ||
| Genes | 5210 | ||
| mRNA | 5210 | ||
| misc RNA | 24 | ||
| rRNA | 12 | ||
| tRNA | 69 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.63 % | ||
| CheckM Completeness | 89.92 % | ||
| CheckM Contamination | 3.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1334732v1 |
| GenBank Assembly Accession | GCA_013347325.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013347325.1 [NCBI] |
| BioSample | SAMN11056354 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2019-03-05T13:52:05.800 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 82541 |
| Isolation Source | clinical isolate |
| Geo Location | USA: KY |
