Genome Meta Information: Metamycoplasma hominis SS25 (GCA_013367975.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013367975.1 | ||
| HOMD Taxon-ID | HMT-0632 | ||
| Species Name (in use by HOMD) | Metamycoplasma hominis | ||
| Organism Name (as deposited) | HMT-632 Metamycoplasma hominis SS25 | ||
| Strain or Isolate | SS25 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma; s__Metamycoplasma hominis |
||
| Sequencing Technology | Nanopore + Illumina | ||
| Genome Coverage | 1088 | ||
| Contigs |
|
||
| Total Sequence Length | 672,843 (bp) | ||
| GC Percentage | 27.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/367/975/GCA_013367975.1_ASM1336797v1 | ||
| CDS | 1113 | ||
| Genes | 1155 | ||
| mRNA | 1155 | ||
| misc RNA | 3 | ||
| rRNA | 5 | ||
| tRNA | 33 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.94 % | ||
| CheckM Completeness | 97.56 % | ||
| CheckM Contamination | 0.88 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1336797v1 |
| GenBank Assembly Accession | GCA_013367975.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013367975.1 [NCBI] |
| BioSample | SAMN15042593 [NCBI] |
| BioProject | PRJNA429440 [NCBI] |
| Submitter | University Hospital of Dusseldorf |
| Submission Date | 2020-05-28T03:59:05.080 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2098 |
| Isolation Source | |
| Geo Location | Missing |
