Genome Meta Information: Peptoanaerobacter stomatis W5028 (GCA_013394875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013394875.1 | ||
| HOMD Taxon-ID | HMT-0081 | ||
| Species Name (in use by HOMD) | Peptoanaerobacter stomatis | ||
| Organism Name (as deposited) | HMT-081 Peptoanaerobacter sp. HMT-081 W5028 | ||
| Strain or Isolate | W5028 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Filifactoraceae;g__Peptoanaerobacter; s__Peptoanaerobacter stomatis_A |
||
| Sequencing Technology | PacBio RS II | ||
| Genome Coverage | 156 | ||
| Contigs |
|
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| Total Sequence Length | 2,575,607 (bp) | ||
| GC Percentage | 30.72 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/394/875/GCA_013394875.1_ASM1339487v1 | ||
| CDS | 2157 | ||
| Genes | 2216 | ||
| mRNA | 2216 | ||
| misc RNA | 22 | ||
| rRNA | 9 | ||
| tRNA | 27 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1339487v1 |
| GenBank Assembly Accession | GCA_013394875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013394875.1 [NCBI] |
| BioSample | SAMN15358171 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2020-06-24T14:50:04.516 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JABXYS01 |
| NCBI TaxID | 2748177 |
| Isolation Source | sub-gingival plaque oral cavity |
| Geo Location | USA: Blacksberg, Virginia |
