Genome Meta Information: Corynebacterium durum DSM 45333 (GCA_013410305.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013410305.1 | ||
| HOMD Taxon-ID | HMT-0595 | ||
| Species Name (in use by HOMD) | Corynebacterium durum | ||
| Organism Name (as deposited) | HMT-595 Corynebacterium durum DSM 45333 | ||
| Strain or Isolate | DSM 45333 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium durum |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 353 | ||
| Contigs |
|
||
| Total Sequence Length | 2,800,016 (bp) | ||
| GC Percentage | 57.15 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/410/305/GCA_013410305.1_ASM1341030v1 | ||
| CDS | 2584 | ||
| Genes | 2661 | ||
| mRNA | 2661 | ||
| misc RNA | 15 | ||
| rRNA | 10 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.85 % | ||
| CheckM Contamination | 0.41 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1341030v1 |
| GenBank Assembly Accession | GCA_013410305.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013410305.1 [NCBI] |
| BioSample | SAMN14908451 [NCBI] |
| BioProject | PRJNA632267 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2020-05-12T22:02:20.933 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JACCFR01 |
| NCBI TaxID | 61592 |
| Isolation Source | missing |
| Geo Location | France:Strasbourg, France |
