Genome Meta Information: Neisseria sicca DSM 17713 (GCA_014054945.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014054945.1 | ||
| HOMD Taxon-ID | HMT-0764 | ||
| Species Name (in use by HOMD) | Neisseria sicca | ||
| Organism Name (as deposited) | HMT-764 Neisseria sicca DSM 17713 | ||
| Strain or Isolate | DSM 17713 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria sicca |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 429 | ||
| Contigs |
|
||
| Total Sequence Length | 2,864,419 (bp) | ||
| GC Percentage | 50.91 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/054/945/GCA_014054945.1_ASM1405494v1 | ||
| CDS | 2565 | ||
| Genes | 2665 | ||
| mRNA | 2665 | ||
| misc RNA | 21 | ||
| rRNA | 12 | ||
| tRNA | 66 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.97 % | ||
| CheckM Completeness | 99.77 % | ||
| CheckM Contamination | 0.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1405494v1 |
| GenBank Assembly Accession | GCA_014054945.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014054945.1 [NCBI] |
| BioSample | SAMN15603184 [NCBI] |
| BioProject | PRJNA647881 [NCBI] |
| Submitter | INRS-Institut Armand-Frappier |
| Submission Date | 2020-07-22T13:58:04.293 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 490 |
| Isolation Source | pharyngeal mucosa |
| Geo Location | United Kingdom |
