Genome Meta Information: Neisseria bacilliformis DSM 23338 (GCA_014055025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014055025.1 | ||
| HOMD Taxon-ID | HMT-0013 | ||
| Species Name (in use by HOMD) | Neisseria bacilliformis | ||
| Organism Name (as deposited) | HMT-013 Neisseria bacilliformis DSM 23338 | ||
| Strain or Isolate | DSM 23338 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria bacilliformis |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 413 | ||
| Contigs |
|
||
| Total Sequence Length | 2,492,712 (bp) | ||
| GC Percentage | 59.44 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/055/025/GCA_014055025.1_ASM1405502v1 | ||
| CDS | 2302 | ||
| Genes | 2447 | ||
| mRNA | 2447 | ||
| misc RNA | 70 | ||
| rRNA | 12 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.97 % | ||
| CheckM Completeness | 97.29 % | ||
| CheckM Contamination | 0.8 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1405502v1 |
| GenBank Assembly Accession | GCA_014055025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014055025.1 [NCBI] |
| BioSample | SAMN15603180 [NCBI] |
| BioProject | PRJNA647881 [NCBI] |
| Submitter | INRS-Institut Armand-Frappier |
| Submission Date | 2020-07-22T13:58:04.213 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 267212 |
| Isolation Source | submandibular wound of a 53-year-old man |
| Geo Location | USA: Texas |
