Genome Meta Information: Pseudomonas oleovorans MSPm1 (GCA_014109765.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014109765.1 | ||
| HOMD Taxon-ID | HMT-0740 | ||
| Species Name (in use by HOMD) | Pseudomonas oleovorans | ||
| Organism Name (as deposited) | HMT-740 Pseudomonas oleovorans MSPm1 | ||
| Strain or Isolate | MSPm1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E; s__Pseudomonas_E berkeleyensis |
||
| Sequencing Technology | PACBIO | ||
| Genome Coverage | 159 | ||
| Contigs |
|
||
| Total Sequence Length | 5,654,212 (bp) | ||
| GC Percentage | 62.41 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/109/765/GCA_014109765.1_ASM1410976v1 | ||
| CDS | 5155 | ||
| Genes | 5328 | ||
| mRNA | 5328 | ||
| misc RNA | 90 | ||
| rRNA | 12 | ||
| tRNA | 70 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 100 % | ||
| CheckM Completeness | 99.84 % | ||
| CheckM Contamination | 0.54 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1410976v1 |
| GenBank Assembly Accession | GCA_014109765.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014109765.1 [NCBI] |
| BioSample | SAMN14598238 [NCBI] |
| BioProject | PRJNA624308 [NCBI] |
| Submitter | None |
| Submission Date | 2020-04-14T16:31:04.456 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2726956 |
| Isolation Source | Mesocom |
| Geo Location | USA: Berkley, California |
