Genome Meta Information: Bacteroides thetaiotaomicron DSM 2079 (GCA_014131755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014131755.1 | ||
| HOMD Taxon-ID | HMT-0970 | ||
| Species Name (in use by HOMD) | Bacteroides thetaiotaomicron | ||
| Organism Name (as deposited) | HMT-970 Bacteroides thetaiotaomicron DSM 2079 | ||
| Strain or Isolate | DSM 2079 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides thetaiotaomicron |
||
| Sequencing Technology | PacBio; Illumina MiSeq | ||
| Genome Coverage | 256 | ||
| Contigs |
|
||
| Total Sequence Length | 6,304,193 (bp) | ||
| GC Percentage | 42.88 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/131/755/GCA_014131755.1_ASM1413175v1 | ||
| CDS | 4924 | ||
| Genes | 5037 | ||
| mRNA | 5037 | ||
| misc RNA | 27 | ||
| rRNA | 15 | ||
| tRNA | 70 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.05 % | ||
| CheckM Contamination | 0.41 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1413175v1 |
| GenBank Assembly Accession | GCA_014131755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014131755.1 [NCBI] |
| BioSample | SAMN11776005 [NCBI] |
| BioProject | PRJNA543750 [NCBI] |
| Submitter | Helmholtz Centre for Environmental Research - UFZ |
| Submission Date | 2019-05-20T07:46:04.920 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 818 |
| Isolation Source | |
| Geo Location | not determined |
