Genome Meta Information: Bacteroides pyogenes DSM 19673 (GCA_014196225.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014196225.1 | ||
| HOMD Taxon-ID | HMT-0787 | ||
| Species Name (in use by HOMD) | Bacteroides pyogenes | ||
| Organism Name (as deposited) | HMT-787 Bacteroides pyogenes DSM 19673 | ||
| Strain or Isolate | DSM 19673 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides pyogenes_A |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 442 | ||
| Contigs |
|
||
| Total Sequence Length | 3,394,239 (bp) | ||
| GC Percentage | 46.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/196/225/GCA_014196225.1_ASM1419622v1 | ||
| CDS | 2791 | ||
| Genes | 2886 | ||
| mRNA | 2886 | ||
| misc RNA | 30 | ||
| rRNA | 3 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.65 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1419622v1 |
| GenBank Assembly Accession | GCA_014196225.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014196225.1 [NCBI] |
| BioSample | SAMN13172994 [NCBI] |
| BioProject | PRJNA583266 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2019-10-31T16:40:04.380 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JACIDI01 |
| NCBI TaxID | 310300 |
| Isolation Source | missing |
| Geo Location | missing |
