Genome Meta Information: Streptococcus cristatus F0329 (GCA_014338595.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014338595.1 | ||
| HOMD Taxon-ID | HMT-0578 | ||
| Species Name (in use by HOMD) | Streptococcus cristatus | ||
| Organism Name (as deposited) | HMT-578 Streptococcus cristatus F0329 | ||
| Strain or Isolate | F0329 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus cristatus_N |
||
| Sequencing Technology | Illumina HiSeq; Oxford Nanopore Minion | ||
| Genome Coverage | 594 | ||
| Contigs |
|
||
| Total Sequence Length | 1,881,435 (bp) | ||
| GC Percentage | 42.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/338/595/GCA_014338595.1_ASM1433859v1 | ||
| CDS | 1833 | ||
| Genes | 1904 | ||
| mRNA | 1904 | ||
| misc RNA | 29 | ||
| rRNA | 3 | ||
| tRNA | 38 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.07 % | ||
| CheckM Completeness | 98.07 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1433859v1 |
| GenBank Assembly Accession | GCA_014338595.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014338595.1 [NCBI] |
| BioSample | SAMN12272123 [NCBI] |
| BioProject | PRJNA526114 [NCBI] |
| Submitter | University of Nevada, Reno |
| Submission Date | 2019-07-14T16:07:05.140 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VKGS01 |
| NCBI TaxID | 45634 |
| Isolation Source | Oral cavity |
| Geo Location | USA |
