Genome Meta Information: Staphylococcus warneri WS479 (GCA_014495745.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014495745.1 | ||
| HOMD Taxon-ID | HMT-0076 | ||
| Species Name (in use by HOMD) | Staphylococcus warneri | ||
| Organism Name (as deposited) | HMT-076 Staphylococcus warneri WS479 | ||
| Strain or Isolate | WS479 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus warneri |
||
| Sequencing Technology | Oxford Nanopore MinION; Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,564,394 (bp) | ||
| GC Percentage | 32.81 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/495/745/GCA_014495745.1_ASM1449574v1 | ||
| CDS | 2474 | ||
| Genes | 2604 | ||
| mRNA | 2604 | ||
| misc RNA | 48 | ||
| rRNA | 19 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.26 % | ||
| CheckM Completeness | 97.83 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1449574v1 |
| GenBank Assembly Accession | GCA_014495745.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014495745.1 [NCBI] |
| BioSample | SAMN15946583 [NCBI] |
| BioProject | PRJNA660332 [NCBI] |
| Submitter | Wenzhou Medical University |
| Submission Date | 2020-08-31T07:13:05.433 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1292 |
| Isolation Source | Homo sapiens |
| Geo Location | China: Wenzhou |
