Genome Meta Information: Neisseria cinerea RH3002v2f (GCA_014596375.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014596375.1 | ||
| HOMD Taxon-ID | HMT-0956 | ||
| Species Name (in use by HOMD) | Neisseria cinerea | ||
| Organism Name (as deposited) | HMT-956 Neisseria cinerea RH3002v2f | ||
| Strain or Isolate | RH3002v2f | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria cinerea |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 30 | ||
| Contigs |
|
||
| Total Sequence Length | 1,953,373 (bp) | ||
| GC Percentage | 50.61 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/596/375/GCA_014596375.1_ASM1459637v1 | ||
| CDS | 1884 | ||
| Genes | 1960 | ||
| mRNA | 1960 | ||
| misc RNA | 18 | ||
| rRNA | 3 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 97.05 % | ||
| CheckM Contamination | 0.29 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1459637v1 |
| GenBank Assembly Accession | GCA_014596375.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014596375.1 [NCBI] |
| BioSample | SAMN05362771 [NCBI] |
| BioProject | PRJNA327999 [NCBI] |
| Submitter | Kingston University |
| Submission Date | 2016-07-06T11:46:03.360 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | MAYZ01 |
| NCBI TaxID | 1871108 |
| Isolation Source | |
| Geo Location | United Kingdom: Egham |
