Genome Meta Information: Micrococcus luteus DSM 24531 (GCA_014874165.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014874165.1 | ||
| HOMD Taxon-ID | HMT-0087 | ||
| Species Name (in use by HOMD) | Micrococcus luteus | ||
| Organism Name (as deposited) | HMT-087 Micrococcus luteus DSM 24531 | ||
| Strain or Isolate | DSM 24531 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Micrococcus; s__Micrococcus luteus |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 401 | ||
| Contigs |
|
||
| Total Sequence Length | 2,469,491 (bp) | ||
| GC Percentage | 73.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/874/165/GCA_014874165.1_ASM1487416v1 | ||
| CDS | 2221 | ||
| Genes | 2296 | ||
| mRNA | 2296 | ||
| misc RNA | 16 | ||
| rRNA | 6 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.96 % | ||
| CheckM Completeness | 98.26 % | ||
| CheckM Contamination | 0.46 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1487416v1 |
| GenBank Assembly Accession | GCA_014874165.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014874165.1 [NCBI] |
| BioSample | SAMN15741210 [NCBI] |
| BioProject | PRJNA652996 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2020-08-05T17:58:13.173 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JADBEH01 |
| NCBI TaxID | 566027 |
| Isolation Source | missing |
| Geo Location | missing |
