Taxon Table | Genome Table
Genome Meta Information:
Lautropia
mirabilis
JCVI_47_bin.7 (GCA_015254865.1)
| HOMD Genome-ID |
GCA_015254865.1
|
| HOMD Taxon-ID |
HMT-0022
|
| Species Name (in use by HOMD) |
Lautropia mirabilis
|
| Organism Name (as deposited) |
HMT-022 Lautropia mirabilis JCVI_47_bin.7
|
| Strain or Isolate |
JCVI_47_bin.7
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Lautropia;
s__Lautropia mirabilis |
| Sequencing Technology |
Illumina NextSeq
|
| Genome Coverage |
1.03673
|
| Contigs |
Number of Contigs: 170
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
3,045,803 (bp) |
| GC Percentage |
65.63
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/254/865/GCA_015254865.1_ASM1525486v1
|
| CDS |
2463
|
| Genes |
2517
|
| mRNA |
2517
|
| misc RNA |
12
|
| rRNA |
0
|
| tRNA |
42
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
96.53 %
|
| CheckM Completeness |
89.79 %
|
| CheckM Contamination |
1.84 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM1525486v1
|
| GenBank Assembly Accession |
GCA_015254865.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_015254865.1
[NCBI]
|
| BioSample |
SAMN14570806
[NCBI]
|
| BioProject |
PRJNA624185
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2020-04-09T20:00:10.030
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JABZPH01
|
| NCBI TaxID |
47671
|
| Isolation Source |
saliva
|
| Geo Location |
USA: UCLA School of Dentistry
|
