Taxon Table | Genome Table
Genome Meta Information:
Nanosyncoccus
sp. HMT-351
JCVI_47_bin.30 (GCA_015257445.1)
| HOMD Genome-ID |
GCA_015257445.1
|
| HOMD Taxon-ID |
HMT-0351
|
| Species Name (in use by HOMD) |
Nanosyncoccus sp. HMT-351
|
| Organism Name (as deposited) |
HMT-351 Nanosyncoccus sp. HMT-351 JCVI_47_bin.30
|
| Strain or Isolate |
JCVI_47_bin.30
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__Nanosyncoccaceae;g__Nanosyncoccus;
s__Nanosyncoccus sp015257445 |
| Sequencing Technology |
Illumina NextSeq
|
| Genome Coverage |
7.43873
|
| Contigs |
Number of Contigs: 185
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
714,681 (bp) |
| GC Percentage |
41.04
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/257/445/GCA_015257445.1_ASM1525744v1
|
| CDS |
637
|
| Genes |
677
|
| mRNA |
677
|
| misc RNA |
2
|
| rRNA |
0
|
| tRNA |
38
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
0 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM1525744v1
|
| GenBank Assembly Accession |
GCA_015257445.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMN14570673
[NCBI]
|
| BioProject |
PRJNA624185
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2020-04-09T20:00:07.740
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JABZKE01
|
| NCBI TaxID |
2725945
|
| Isolation Source |
saliva
|
| Geo Location |
USA: UCLA School of Dentistry
|
