Genome Meta Information: Nanosyncoccus sp. HMT-364 JCVI_1_bin.4 (GCA_015257505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_015257505.1 | ||
| HOMD Taxon-ID | HMT-0364 | ||
| Species Name (in use by HOMD) | Nanosyncoccus sp. HMT-364 | ||
| Organism Name (as deposited) | HMT-364 Nanosyncoccus sp. HMT-364 JCVI_1_bin.4 | ||
| Strain or Isolate | JCVI_1_bin.4 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__Nanosyncoccaceae;g__Nanosyncoccus; s__Nanosyncoccus sp015257505 |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 7.61873 | ||
| Contigs |
|
||
| Total Sequence Length | 776,077 (bp) | ||
| GC Percentage | 41.29 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/257/505/GCA_015257505.1_ASM1525750v1 | ||
| CDS | 711 | ||
| Genes | 763 | ||
| mRNA | 763 | ||
| misc RNA | 1 | ||
| rRNA | 2 | ||
| tRNA | 49 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1525750v1 |
| GenBank Assembly Accession | GCA_015257505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN14570670 [NCBI] |
| BioProject | PRJNA624185 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2020-04-09T20:00:07.693 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JABZKB01 |
| NCBI TaxID | 2725945 |
| Isolation Source | saliva |
| Geo Location | USA: UCLA School of Dentistry |
