Genome Meta Information: Prevotella histicola JCVI_43_bin.10 (GCA_015262435.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_015262435.1 | ||
| HOMD Taxon-ID | HMT-0298 | ||
| Species Name (in use by HOMD) | Prevotella histicola | ||
| Organism Name (as deposited) | HMT-298 Prevotella histicola JCVI_43_bin.10 | ||
| Strain or Isolate | JCVI_43_bin.10 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella histicola |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 14.9993 | ||
| Contigs |
|
||
| Total Sequence Length | 2,921,805 (bp) | ||
| GC Percentage | 41.05 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/262/435/GCA_015262435.1_ASM1526243v1 | ||
| CDS | 2382 | ||
| Genes | 2432 | ||
| mRNA | 2432 | ||
| misc RNA | 7 | ||
| rRNA | 1 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.95 % | ||
| CheckM Completeness | 96.36 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1526243v1 |
| GenBank Assembly Accession | GCA_015262435.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_015262435.1 [NCBI] |
| BioSample | SAMN14570902 [NCBI] |
| BioProject | PRJNA624185 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2020-04-09T20:41:07.536 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JABZSV01 |
| NCBI TaxID | 470565 |
| Isolation Source | saliva |
| Geo Location | USA: UCLA School of Dentistry |
