Taxon Table | Genome Table
Genome Meta Information:
Parvimonas
sp. HMT-110
JCVI_32_bin.37 (GCA_015263205.1)
| HOMD Genome-ID |
GCA_015263205.1
|
| HOMD Taxon-ID |
HMT-0110
|
| Species Name (in use by HOMD) |
Parvimonas sp. HMT-110
|
| Organism Name (as deposited) |
HMT-110 Parvimonas sp. HMT-110 JCVI_32_bin.37
|
| Strain or Isolate |
JCVI_32_bin.37
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Parvimonas;
s__Parvimonas sp000214475 |
| Sequencing Technology |
Illumina NextSeq
|
| Genome Coverage |
4.36922
|
| Contigs |
Number of Contigs: 111
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,193,945 (bp) |
| GC Percentage |
27.77
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/263/205/GCA_015263205.1_ASM1526320v1
|
| CDS |
1118
|
| Genes |
1147
|
| mRNA |
1147
|
| misc RNA |
19
|
| rRNA |
1
|
| tRNA |
9
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
0 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM1526320v1
|
| GenBank Assembly Accession |
GCA_015263205.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMN14570862
[NCBI]
|
| BioProject |
PRJNA624185
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2020-04-09T20:41:06.910
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JABZRH01
|
| NCBI TaxID |
1944660
|
| Isolation Source |
saliva
|
| Geo Location |
USA: UCLA School of Dentistry
|
