Genome Meta Information: Brevundimonas diminuta FDAARGOS_1026 (GCA_016127655.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016127655.1 | ||
| HOMD Taxon-ID | HMT-0590 | ||
| Species Name (in use by HOMD) | Brevundimonas diminuta | ||
| Organism Name (as deposited) | HMT-590 Brevundimonas diminuta FDAARGOS_1026 | ||
| Strain or Isolate | FDAARGOS_1026 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas; s__Brevundimonas diminuta |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 1230.37 | ||
| Contigs |
|
||
| Total Sequence Length | 3,549,082 (bp) | ||
| GC Percentage | 67.43 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/127/655/GCA_016127655.1_ASM1612765v1 | ||
| CDS | 3442 | ||
| Genes | 3515 | ||
| mRNA | 3515 | ||
| misc RNA | 15 | ||
| rRNA | 5 | ||
| tRNA | 53 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 97.77 % | ||
| CheckM Completeness | 99.59 % | ||
| CheckM Contamination | 4.62 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1612765v1 |
| GenBank Assembly Accession | GCA_016127655.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016127655.1 [NCBI] |
| BioSample | SAMN16357195 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2020-10-03T14:56:09.143 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 293 |
| Isolation Source | missing |
| Geo Location | USA:VA |
