Genome Meta Information: Ralstonia pickettii K-288 (GCA_016466415.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016466415.2 | ||
| HOMD Taxon-ID | HMT-0854 | ||
| Species Name (in use by HOMD) | Ralstonia pickettii | ||
| Organism Name (as deposited) | HMT-854 Ralstonia pickettii K-288 | ||
| Strain or Isolate | K-288 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia; s__Ralstonia pickettii |
||
| Sequencing Technology | Illumina HiSeq; PacBio RS | ||
| Genome Coverage | 125.72 | ||
| Contigs |
|
||
| Total Sequence Length | 4,831,420 (bp) | ||
| GC Percentage | 63.91 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/466/415/GCA_016466415.2_ASM1646641v2 | ||
| CDS | 4464 | ||
| Genes | 4559 | ||
| mRNA | 4559 | ||
| misc RNA | 30 | ||
| rRNA | 9 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 88.43 % | ||
| CheckM Contamination | 2.94 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1646641v2 |
| GenBank Assembly Accession | GCA_016466415.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016466415.2 [NCBI] |
| BioSample | SAMN17126705 [NCBI] |
| BioProject | PRJNA686860 [NCBI] |
| Submitter | University of Southampton |
| Submission Date | 2020-12-21T06:54:08.903 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 329 |
| Isolation Source | missing |
| Geo Location | USA |
