Genome Meta Information: Catonella massiliensis Marseille-Q4567 (GCA_016651435.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016651435.1 | ||
| HOMD Taxon-ID | HMT-0428 | ||
| Species Name (in use by HOMD) | Catonella massiliensis | ||
| Organism Name (as deposited) | HMT-428 Catonella massiliensis Marseille-Q4567 | ||
| Strain or Isolate | Marseille-Q4567 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Catonella; s__Catonella massiliensis |
||
| Sequencing Technology | Illumina; Oxford Nanopore GridION | ||
| Genome Coverage | 131.6 | ||
| Contigs |
|
||
| Total Sequence Length | 3,122,925 (bp) | ||
| GC Percentage | 38.76 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/651/435/GCA_016651435.1_ASM1665143v1 | ||
| CDS | 2768 | ||
| Genes | 2849 | ||
| mRNA | 2849 | ||
| misc RNA | 30 | ||
| rRNA | 8 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.75 % | ||
| CheckM Contamination | 0.62 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1665143v1 |
| GenBank Assembly Accession | GCA_016651435.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016651435.1 [NCBI] |
| BioSample | SAMN17257549 [NCBI] |
| BioProject | PRJNA690700 [NCBI] |
| Submitter | IHU - MI |
| Submission Date | 2021-01-08T08:03:04.220 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAEPRJ01 |
| NCBI TaxID | 2799636 |
| Isolation Source | saliva |
| Geo Location | France: Marseille |
