Genome Meta Information: Staphylococcus auricularis s52 (GCA_016808715.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016808715.1 | ||
| HOMD Taxon-ID | HMT-0331 | ||
| Species Name (in use by HOMD) | Staphylococcus auricularis | ||
| Organism Name (as deposited) | HMT-331 Staphylococcus auricularis s52 | ||
| Strain or Isolate | s52 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus auricularis |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 1063 | ||
| Contigs |
|
||
| Total Sequence Length | 2,275,253 (bp) | ||
| GC Percentage | 37.13 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/808/715/GCA_016808715.1_ASM1680871v1 | ||
| CDS | 2200 | ||
| Genes | 2291 | ||
| mRNA | 2291 | ||
| misc RNA | 41 | ||
| rRNA | 1 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.73 % | ||
| CheckM Completeness | 95.39 % | ||
| CheckM Contamination | 1.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1680871v1 |
| GenBank Assembly Accession | GCA_016808715.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016808715.1 [NCBI] |
| BioSample | SAMN09865988 [NCBI] |
| BioProject | PRJNA486830 [NCBI] |
| Submitter | NASA Ames Research Center |
| Submission Date | 2018-08-20T15:49:07.686 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QVVG01 |
| NCBI TaxID | 29379 |
| Isolation Source | |
| Geo Location | USA: International Space Stati |
