Genome Meta Information: Parabacteroides distasonis FDAARGOS_1234 (GCA_016888905.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016888905.1 | ||
| HOMD Taxon-ID | HMT-0973 | ||
| Species Name (in use by HOMD) | Parabacteroides distasonis | ||
| Organism Name (as deposited) | HMT-973 Parabacteroides distasonis FDAARGOS_1234 | ||
| Strain or Isolate | FDAARGOS_1234 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides; s__Parabacteroides distasonis |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 617.51 | ||
| Contigs |
|
||
| Total Sequence Length | 4,812,038 (bp) | ||
| GC Percentage | 45.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/888/905/GCA_016888905.1_ASM1688890v1 | ||
| CDS | 3993 | ||
| Genes | 4113 | ||
| mRNA | 4113 | ||
| misc RNA | 15 | ||
| rRNA | 21 | ||
| tRNA | 83 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99 % | ||
| CheckM Contamination | 0.27 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1688890v1 |
| GenBank Assembly Accession | GCA_016888905.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016888905.1 [NCBI] |
| BioSample | SAMN16357376 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2020-10-03T14:56:12.776 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 823 |
| Isolation Source | missing |
| Geo Location | USA:MD |
