Taxon Table | Genome Table
Genome Meta Information:
Dietzia
cinnamea
BP-168 (GCA_016905945.1)
| HOMD Genome-ID |
GCA_016905945.1
|
| HOMD Taxon-ID |
HMT-0368
|
| Species Name (in use by HOMD) |
Dietzia cinnamea
|
| Organism Name (as deposited) |
HMT-368 Dietzia cinnamea BP-168
|
| Strain or Isolate |
BP-168
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Dietzia;
s__Dietzia cinnamea |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
200
|
| Contigs |
Number of Contigs: 156
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
3,590,735 (bp) |
| GC Percentage |
70.71
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/905/945/GCA_016905945.1_ASM1690594v1
|
| CDS |
3354
|
| Genes |
3444
|
| mRNA |
3444
|
| misc RNA |
24
|
| rRNA |
6
|
| tRNA |
59
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
97.23 %
|
| CheckM Completeness |
99.16 %
|
| CheckM Contamination |
0.28 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM1690594v1
|
| GenBank Assembly Accession |
GCA_016905945.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_016905945.1
[NCBI]
|
| BioSample |
SAMN17884709
[NCBI]
|
| BioProject |
PRJNA701491
[NCBI]
|
| Submitter |
ZHEJIANG UNIVERSITY
|
| Submission Date |
2021-02-11T20:20:07.290
|
| Assembly Method |
|
| Assembly Level |
Scaffold
|
| Sequencing Status |
|
| WGS
Project |
JAFFGT01
|
| NCBI TaxID |
321318
|
| Isolation Source |
missing
|
| Geo Location |
USA
|
