Genome Meta Information: Brevibacterium paucivorans DSM 13657 (GCA_016907735.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016907735.1 | ||
| HOMD Taxon-ID | HMT-0340 | ||
| Species Name (in use by HOMD) | Brevibacterium paucivorans | ||
| Organism Name (as deposited) | HMT-340 Brevibacterium paucivorans DSM 13657 | ||
| Strain or Isolate | DSM 13657 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Brevibacteriaceae;g__Brevibacterium; s__Brevibacterium paucivorans |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 400 | ||
| Contigs |
|
||
| Total Sequence Length | 2,410,104 (bp) | ||
| GC Percentage | 58.32 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/907/735/GCA_016907735.1_ASM1690773v1 | ||
| CDS | 2191 | ||
| Genes | 2256 | ||
| mRNA | 2256 | ||
| misc RNA | 6 | ||
| rRNA | 9 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 93.88 % | ||
| CheckM Contamination | 0.51 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1690773v1 |
| GenBank Assembly Accession | GCA_016907735.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016907735.1 [NCBI] |
| BioSample | SAMN17619979 [NCBI] |
| BioProject | PRJNA695764 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2021-01-28T19:39:12.487 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAFBCP01 |
| NCBI TaxID | 170994 |
| Isolation Source | missing |
| Geo Location | Belgium |
