Genome Meta Information: Proteus mirabilis PM52260 (GCA_016939715.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016939715.1 | ||
| HOMD Taxon-ID | HMT-0676 | ||
| Species Name (in use by HOMD) | Proteus mirabilis | ||
| Organism Name (as deposited) | HMT-676 Proteus mirabilis PM52260 | ||
| Strain or Isolate | PM52260 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Proteus; s__Proteus mirabilis |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 250 | ||
| Contigs |
|
||
| Total Sequence Length | 4,296,295 (bp) | ||
| GC Percentage | 39.52 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/939/715/GCA_016939715.1_ASM1693971v1 | ||
| CDS | 3934 | ||
| Genes | 4128 | ||
| mRNA | 4128 | ||
| misc RNA | 87 | ||
| rRNA | 22 | ||
| tRNA | 84 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.3 % | ||
| CheckM Completeness | 98.16 % | ||
| CheckM Contamination | 8.21 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1693971v1 |
| GenBank Assembly Accession | GCA_016939715.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016939715.1 [NCBI] |
| BioSample | SAMN16933295 [NCBI] |
| BioProject | PRJNA700516 [NCBI] |
| Submitter | Charles University in Prague |
| Submission Date | 2020-11-27T05:49:07.203 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 584 |
| Isolation Source | sputum |
| Geo Location | Czech Republic: Nymburk |
