Genome Meta Information: Serratia marcescens ATCC 13880 (GCA_017654245.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_017654245.1 | ||
| HOMD Taxon-ID | HMT-0115 | ||
| Species Name (in use by HOMD) | Serratia marcescens | ||
| Organism Name (as deposited) | HMT-115 Serratia marcescens ATCC 13880 | ||
| Strain or Isolate | ATCC 13880 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Serratia; s__Serratia marcescens |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 313 | ||
| Contigs |
|
||
| Total Sequence Length | 5,140,264 (bp) | ||
| GC Percentage | 59.78 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/654/245/GCA_017654245.1_ASM1765424v1 | ||
| CDS | 4721 | ||
| Genes | 4953 | ||
| mRNA | 4953 | ||
| misc RNA | 115 | ||
| rRNA | 22 | ||
| tRNA | 94 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.94 % | ||
| CheckM Completeness | 97.23 % | ||
| CheckM Contamination | 5.45 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1765424v1 |
| GenBank Assembly Accession | GCA_017654245.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_017654245.1 [NCBI] |
| BioSample | SAMN18473280 [NCBI] |
| BioProject | PRJNA716961 [NCBI] |
| Submitter | Massachusetts General Hospital |
| Submission Date | 2021-03-24T14:10:09.606 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 911022 |
| Isolation Source | |
| Geo Location | not collected |
