Genome Meta Information: Neisseria flava NS20201025 (GCA_017753665.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_017753665.1 | ||
| HOMD Taxon-ID | HMT-0609 | ||
| Species Name (in use by HOMD) | Neisseria flava | ||
| Organism Name (as deposited) | HMT-609 Neisseria flava NS20201025 | ||
| Strain or Isolate | NS20201025 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria flava |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 200 | ||
| Contigs |
|
||
| Total Sequence Length | 2,566,407 (bp) | ||
| GC Percentage | 51.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/753/665/GCA_017753665.1_ASM1775366v1 | ||
| CDS | 2277 | ||
| Genes | 2367 | ||
| mRNA | 2367 | ||
| misc RNA | 15 | ||
| rRNA | 12 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.66 % | ||
| CheckM Completeness | 99.57 % | ||
| CheckM Contamination | 0.4 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1775366v1 |
| GenBank Assembly Accession | GCA_017753665.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_017753665.1 [NCBI] |
| BioSample | SAMN18451419 [NCBI] |
| BioProject | PRJNA714501 [NCBI] |
| Submitter | First Affiliated Hospital, School of Medicine, Zhejiang University |
| Submission Date | 2021-03-24T03:39:06.120 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 490 |
| Isolation Source | |
| Geo Location | China:Hangzhou |
