Genome Meta Information: Anaerococcus nagyae DSM 101193 (GCA_017874535.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_017874535.1 | ||
| HOMD Taxon-ID | HMT-0792 | ||
| Species Name (in use by HOMD) | Anaerococcus nagyae | ||
| Organism Name (as deposited) | HMT-792 Anaerococcus nagyae DSM 101193 | ||
| Strain or Isolate | DSM 101193 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus; s__Anaerococcus nagyae |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 478 | ||
| Contigs |
|
||
| Total Sequence Length | 1,751,430 (bp) | ||
| GC Percentage | 30.62 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/874/535/GCA_017874535.1_ASM1787453v1 | ||
| CDS | 1623 | ||
| Genes | 1698 | ||
| mRNA | 1698 | ||
| misc RNA | 24 | ||
| rRNA | 4 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 97.5 % | ||
| CheckM Contamination | 2.47 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1787453v1 |
| GenBank Assembly Accession | GCA_017874535.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_017874535.1 [NCBI] |
| BioSample | SAMN18247816 [NCBI] |
| BioProject | PRJNA709606 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2021-03-10T16:54:40.360 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAGGLS01 |
| NCBI TaxID | 1755241 |
| Isolation Source | missing |
| Geo Location | missing |
