Taxon Table | Genome Table
Genome Meta Information:
Neisseria
polysaccharea
Marseille-Q1983 (GCA_018224585.1)
| HOMD Genome-ID |
GCA_018224585.1
|
| HOMD Taxon-ID |
HMT-0737
|
| Species Name (in use by HOMD) |
Neisseria polysaccharea
|
| Organism Name (as deposited) |
HMT-737 Neisseria polysaccharea Marseille-Q1983
|
| Strain or Isolate |
Marseille-Q1983
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria;
s__Neisseria polysaccharea |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
47.851
|
| Contigs |
Number of Contigs: 118
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,196,582 (bp) |
| GC Percentage |
51.52
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/224/585/GCA_018224585.1_ASM1822458v1
|
| CDS |
2122
|
| Genes |
2190
|
| mRNA |
2190
|
| misc RNA |
19
|
| rRNA |
3
|
| tRNA |
45
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
99.43 %
|
| CheckM Contamination |
0.27 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM1822458v1
|
| GenBank Assembly Accession |
GCA_018224585.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_018224585.1
[NCBI]
|
| BioSample |
SAMN18865352
[NCBI]
|
| BioProject |
PRJNA724933
[NCBI]
|
| Submitter |
IHU Mediterranee Infection
|
| Submission Date |
2021-04-25T08:36:04.367
|
| Assembly Method |
|
| Assembly Level |
Scaffold
|
| Sequencing Status |
|
| WGS
Project |
JAGTUI01
|
| NCBI TaxID |
2830768
|
| Isolation Source |
|
| Geo Location |
France: Marseille
|
