Genome Meta Information: Parabacteroides distasonis CL03T12C09 (GCA_018292145.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_018292145.1 | ||
| HOMD Taxon-ID | HMT-0973 | ||
| Species Name (in use by HOMD) | Parabacteroides distasonis | ||
| Organism Name (as deposited) | HMT-973 Parabacteroides distasonis CL03T12C09 | ||
| Strain or Isolate | CL03T12C09 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides; s__Parabacteroides distasonis |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 321 | ||
| Contigs |
|
||
| Total Sequence Length | 5,062,790 (bp) | ||
| GC Percentage | 45.13 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/292/145/GCA_018292145.1_ASM1829214v1 | ||
| CDS | 4223 | ||
| Genes | 4356 | ||
| mRNA | 4356 | ||
| misc RNA | 30 | ||
| rRNA | 21 | ||
| tRNA | 81 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.93 % | ||
| CheckM Completeness | 98.84 % | ||
| CheckM Contamination | 0.89 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1829214v1 |
| GenBank Assembly Accession | GCA_018292145.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_018292145.1 [NCBI] |
| BioSample | SAMN16451183 [NCBI] |
| BioProject | PRJNA669351 [NCBI] |
| Submitter | Brigham & Womens Hospital |
| Submission Date | 2020-10-19T11:44:40.413 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 999416 |
| Isolation Source | feces |
| Geo Location | USA: Boston |
