Genome Meta Information: Peptoniphilus lacydonensis L2_039_000G1_dasL2_039_000G1_maxbin2.maxbin.073 (GCA_018378045.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_018378045.1 | ||
| HOMD Taxon-ID | HMT-0784 | ||
| Species Name (in use by HOMD) | Peptoniphilus lacydonensis | ||
| Organism Name (as deposited) | HMT-784 Peptoniphilus lacydonensis L2_039_000G1_dasL2_039_000G1_maxbin2.maxbin.073 | ||
| Strain or Isolate | L2_039_000G1_dasL2_039_000G1_maxbin2.maxbin.073 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus_A; s__Peptoniphilus_A lacydonensis |
||
| Sequencing Technology | Illumina NovaSeq 6000 | ||
| Genome Coverage | 24.245 | ||
| Contigs |
|
||
| Total Sequence Length | 1,811,805 (bp) | ||
| GC Percentage | 29.88 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/378/045/GCA_018378045.1_ASM1837804v1 | ||
| CDS | 1687 | ||
| Genes | 1741 | ||
| mRNA | 1741 | ||
| misc RNA | 30 | ||
| rRNA | 1 | ||
| tRNA | 22 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 82.07 % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1837804v1 |
| GenBank Assembly Accession | GCA_018378045.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN17801277 [NCBI] |
| BioProject | PRJNA698986 [NCBI] |
| Submitter | University of California, Berkeley |
| Submission Date | 2021-02-04T18:19:24.946 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAGZYG01 |
| NCBI TaxID | 54005 |
| Isolation Source | infant feces |
| Geo Location | USA: Pittsburgh, Magee-Womens |
