Genome Meta Information: Prevotella melaninogenica SCHI0047.S.2 (GCA_019375575.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019375575.1 | ||
| HOMD Taxon-ID | HMT-0469 | ||
| Species Name (in use by HOMD) | Prevotella melaninogenica | ||
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica SCHI0047.S.2 | ||
| Strain or Isolate | SCHI0047.S.2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella melaninogenica_B |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 145 | ||
| Contigs |
|
||
| Total Sequence Length | 3,112,350 (bp) | ||
| GC Percentage | 40.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/375/575/GCA_019375575.1_ASM1937557v1 | ||
| CDS | 2448 | ||
| Genes | 2508 | ||
| mRNA | 2508 | ||
| misc RNA | 8 | ||
| rRNA | 6 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.64 % | ||
| CheckM Completeness | 91.32 % | ||
| CheckM Contamination | 2.13 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1937557v1 |
| GenBank Assembly Accession | GCA_019375575.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019375575.1 [NCBI] |
| BioSample | SAMN19926189 [NCBI] |
| BioProject | PRJNA742126 [NCBI] |
| Submitter | University of the Sunshine Coast |
| Submission Date | 2021-06-28T23:40:07.486 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHXCE01 |
| NCBI TaxID | 28132 |
| Isolation Source | sputum |
| Geo Location | Australia: Brisbane |
