Genome Meta Information: Staphylococcus aureus RGB-095930 (GCA_019653615.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019653615.1 | ||
| HOMD Taxon-ID | HMT-0550 | ||
| Species Name (in use by HOMD) | Staphylococcus aureus | ||
| Organism Name (as deposited) | HMT-550 Staphylococcus aureus RGB-095930 | ||
| Strain or Isolate | RGB-095930 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus aureus |
||
| Sequencing Technology | Oxford Nanopore MinION; Illumina MiniSeq | ||
| Genome Coverage | 169 | ||
| Contigs |
|
||
| Total Sequence Length | 2,904,556 (bp) | ||
| GC Percentage | 32.86 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/653/615/GCA_019653615.1_ASM1965361v1 | ||
| CDS | 2735 | ||
| Genes | 2930 | ||
| mRNA | 2930 | ||
| misc RNA | 118 | ||
| rRNA | 19 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.1 % | ||
| CheckM Completeness | 97.68 % | ||
| CheckM Contamination | 0.58 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1965361v1 |
| GenBank Assembly Accession | GCA_019653615.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019653615.1 [NCBI] |
| BioSample | SAMN19770946 [NCBI] |
| BioProject | PRJNA739061 [NCBI] |
| Submitter | Leibniz Institute of Photonic Technology (IPHT) |
| Submission Date | 2021-06-18T04:32:05.477 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1280 |
| Isolation Source | swab |
| Geo Location | Germany: Regensburg, Bavaria |
