Genome Meta Information: Neisseria subflava MA3-1 (GCA_019815145.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019815145.1 | ||
| HOMD Taxon-ID | HMT-0476 | ||
| Species Name (in use by HOMD) | Neisseria subflava | ||
| Organism Name (as deposited) | HMT-476 Neisseria subflava MA3-1 | ||
| Strain or Isolate | MA3-1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria sp000186165 |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 908 | ||
| Contigs |
|
||
| Total Sequence Length | 2,361,490 (bp) | ||
| GC Percentage | 49.28 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/815/145/GCA_019815145.1_ASM1981514v1 | ||
| CDS | 2260 | ||
| Genes | 2339 | ||
| mRNA | 2339 | ||
| misc RNA | 21 | ||
| rRNA | 3 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.11 % | ||
| CheckM Completeness | 98.77 % | ||
| CheckM Contamination | 0.6 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1981514v1 |
| GenBank Assembly Accession | GCA_019815145.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019815145.1 [NCBI] |
| BioSample | SAMN20865412 [NCBI] |
| BioProject | PRJNA756409 [NCBI] |
| Submitter | Jeju National University |
| Submission Date | 2021-08-20T03:05:06.257 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAIMJJ01 |
| NCBI TaxID | 28449 |
| Isolation Source | |
| Geo Location | South Korea: Jeju |
