Genome Meta Information: Prevotella nigrescens FDAARGOS_1486 (GCA_019930605.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019930605.1 | ||
| HOMD Taxon-ID | HMT-0693 | ||
| Species Name (in use by HOMD) | Prevotella nigrescens | ||
| Organism Name (as deposited) | HMT-693 Prevotella nigrescens FDAARGOS_1486 | ||
| Strain or Isolate | FDAARGOS_1486 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella nigrescens |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 2253.63 | ||
| Contigs |
|
||
| Total Sequence Length | 2,673,077 (bp) | ||
| GC Percentage | 42.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/930/605/GCA_019930605.1_ASM1993060v1 | ||
| CDS | 2270 | ||
| Genes | 2338 | ||
| mRNA | 2338 | ||
| misc RNA | 7 | ||
| rRNA | 12 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1993060v1 |
| GenBank Assembly Accession | GCA_019930605.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019930605.1 [NCBI] |
| BioSample | SAMN20888903 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2021-08-20T16:18:24.050 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28133 |
| Isolation Source | missing |
| Geo Location | Germany: Braunschweig |
