Genome Meta Information: Neisseria cinerea CCUG 2156 (GCA_021025975.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_021025975.1 | ||
| HOMD Taxon-ID | HMT-0956 | ||
| Species Name (in use by HOMD) | Neisseria cinerea | ||
| Organism Name (as deposited) | HMT-956 Neisseria cinerea CCUG 2156 | ||
| Strain or Isolate | CCUG 2156 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria cinerea |
||
| Sequencing Technology | Ion Torrent | ||
| Genome Coverage | 196 | ||
| Contigs |
|
||
| Total Sequence Length | 1,861,283 (bp) | ||
| GC Percentage | 50.78 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/025/975/GCA_021025975.1_ASM2102597v1 | ||
| CDS | 1750 | ||
| Genes | 1830 | ||
| mRNA | 1830 | ||
| misc RNA | 32 | ||
| rRNA | 3 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 96.39 % | ||
| CheckM Contamination | 0.21 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2102597v1 |
| GenBank Assembly Accession | GCA_021025975.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_021025975.1 [NCBI] |
| BioSample | SAMN23424481 [NCBI] |
| BioProject | PRJNA305687 [NCBI] |
| Submitter | University of Gothenburg - CCUG |
| Submission Date | 2021-11-24T10:39:03.470 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAJNBX01 |
| NCBI TaxID | 483 |
| Isolation Source | nasopharynx, normal mucosa |
| Geo Location | Germany |
