Genome Meta Information: Ligilactobacillus salivarius BNS11 (GCA_021266585.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_021266585.1 | ||
| HOMD Taxon-ID | HMT-0756 | ||
| Species Name (in use by HOMD) | Ligilactobacillus salivarius | ||
| Organism Name (as deposited) | HMT-756 Ligilactobacillus salivarius BNS11 | ||
| Strain or Isolate | BNS11 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Ligilactobacillus; s__Ligilactobacillus salivarius |
||
| Sequencing Technology | Illumina HiSeq; Oxford Nanopore MinION | ||
| Genome Coverage | 160 | ||
| Contigs |
|
||
| Total Sequence Length | 2,298,974 (bp) | ||
| GC Percentage | 32.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/266/585/GCA_021266585.1_ASM2126658v1 | ||
| CDS | 2225 | ||
| Genes | 2365 | ||
| mRNA | 2365 | ||
| misc RNA | 38 | ||
| rRNA | 22 | ||
| tRNA | 79 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.04 % | ||
| CheckM Completeness | 95.47 % | ||
| CheckM Contamination | 1.93 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2126658v1 |
| GenBank Assembly Accession | GCA_021266585.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_021266585.1 [NCBI] |
| BioSample | SAMN24045799 [NCBI] |
| BioProject | PRJNA789063 [NCBI] |
| Submitter | Chinese Academy of Agricultural Sciences |
| Submission Date | 2021-12-15T00:50:03.507 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1624 |
| Isolation Source | |
| Geo Location | China: Heilongjiang province |
