Genome Meta Information: Staphylococcus auricularis Ani-GT-018 (GCA_021367585.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_021367585.1 | ||
| HOMD Taxon-ID | HMT-0331 | ||
| Species Name (in use by HOMD) | Staphylococcus auricularis | ||
| Organism Name (as deposited) | HMT-331 Staphylococcus auricularis Ani-GT-018 | ||
| Strain or Isolate | Ani-GT-018 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus auricularis |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 177.71 | ||
| Contigs |
|
||
| Total Sequence Length | 2,195,146 (bp) | ||
| GC Percentage | 37.22 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/367/585/GCA_021367585.1_ASM2136758v1 | ||
| CDS | 2069 | ||
| Genes | 2176 | ||
| mRNA | 2176 | ||
| misc RNA | 38 | ||
| rRNA | 9 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.76 % | ||
| CheckM Completeness | 96.19 % | ||
| CheckM Contamination | 0.66 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2136758v1 |
| GenBank Assembly Accession | GCA_021367585.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_021367585.1 [NCBI] |
| BioSample | SAMN19114540 [NCBI] |
| BioProject | PRJNA609060 [NCBI] |
| Submitter | ANIWHA |
| Submission Date | 2021-05-12T06:19:05.327 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHCOE01 |
| NCBI TaxID | 29379 |
| Isolation Source | milk samples |
| Geo Location | Belgium:Ghent |
