Genome Meta Information: Staphylococcus epidermidis 52B (GCA_021513055.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_021513055.1 | ||
| HOMD Taxon-ID | HMT-0601 | ||
| Species Name (in use by HOMD) | Staphylococcus epidermidis | ||
| Organism Name (as deposited) | HMT-601 Staphylococcus epidermidis 52B | ||
| Strain or Isolate | 52B | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus epidermidis |
||
| Sequencing Technology | Illumina HiSeq; Oxford Nanopore MinION | ||
| Genome Coverage | 3309 | ||
| Contigs |
|
||
| Total Sequence Length | 2,532,862 (bp) | ||
| GC Percentage | 32.15 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/513/055/GCA_021513055.1_ASM2151305v1 | ||
| CDS | 2309 | ||
| Genes | 2480 | ||
| mRNA | 2480 | ||
| misc RNA | 91 | ||
| rRNA | 19 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.56 % | ||
| CheckM Completeness | 99.47 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2151305v1 |
| GenBank Assembly Accession | GCA_021513055.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_021513055.1 [NCBI] |
| BioSample | SAMN18740297 [NCBI] |
| BioProject | PRJNA721845 [NCBI] |
| Submitter | LOreal |
| Submission Date | 2021-04-14T04:57:07.123 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1282 |
| Isolation Source | |
| Geo Location | France |
