Genome Meta Information: Metamycoplasma salivarium ATCC 23557 (GCA_021600305.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_021600305.1 | ||
| HOMD Taxon-ID | HMT-0754 | ||
| Species Name (in use by HOMD) | Metamycoplasma salivarium | ||
| Organism Name (as deposited) | HMT-754 Metamycoplasma salivarium ATCC 23557 | ||
| Strain or Isolate | ATCC 23557 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma; s__Metamycoplasma salivarium |
||
| Sequencing Technology | DNBSEQ-G400RS FAST | ||
| Genome Coverage | 310 | ||
| Contigs |
|
||
| Total Sequence Length | 718,986 (bp) | ||
| GC Percentage | 26.49 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/600/305/GCA_021600305.1_ASM2160030v1 | ||
| CDS | 1291 | ||
| Genes | 1330 | ||
| mRNA | 1330 | ||
| misc RNA | 2 | ||
| rRNA | 3 | ||
| tRNA | 33 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.01 % | ||
| CheckM Completeness | 91.22 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2160030v1 |
| GenBank Assembly Accession | GCA_021600305.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_021600305.1 [NCBI] |
| BioSample | SAMD00322330 [NCBI] |
| BioProject | PRJDB11649 [NCBI] |
| Submitter | Iwate Medical University |
| Submission Date | 2021-12-02T01:00:58.130 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | BPLW01 |
| NCBI TaxID | 2124 |
| Isolation Source | |
| Geo Location | missing |
