Genome Meta Information: Haemophilus sp. HMT-036 SZY H68 (GCA_021764795.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_021764795.1 | ||
| HOMD Taxon-ID | HMT-0036 | ||
| Species Name (in use by HOMD) | Haemophilus sp. HMT-036 | ||
| Organism Name (as deposited) | HMT-036 Haemophilus sp. HMT-036 SZY H68 | ||
| Strain or Isolate | SZY H68 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus; s__Haemophilus haemolyticus_K |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 120 | ||
| Contigs |
|
||
| Total Sequence Length | 1,902,918 (bp) | ||
| GC Percentage | 38.39 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/764/795/GCA_021764795.1_ASM2176479v1 | ||
| CDS | 1751 | ||
| Genes | 1858 | ||
| mRNA | 1858 | ||
| misc RNA | 29 | ||
| rRNA | 19 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.94 % | ||
| CheckM Completeness | 99.39 % | ||
| CheckM Contamination | 0.1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2176479v1 |
| GenBank Assembly Accession | GCA_021764795.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN25235948 [NCBI] |
| BioProject | PRJNA800204 [NCBI] |
| Submitter | The Second Clinic Medical College |
| Submission Date | 2022-01-25T03:38:02.996 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2582921 |
| Isolation Source | sputum specimens |
| Geo Location | China:Guangdong |
