Genome Meta Information: Staphylococcus warneri Cap 100.2 (GCA_022291175.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022291175.1 | ||
| HOMD Taxon-ID | HMT-0076 | ||
| Species Name (in use by HOMD) | Staphylococcus warneri | ||
| Organism Name (as deposited) | HMT-076 Staphylococcus warneri Cap 100.2 | ||
| Strain or Isolate | Cap 100.2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus warneri |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 263 | ||
| Contigs |
|
||
| Total Sequence Length | 2,496,383 (bp) | ||
| GC Percentage | 32.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/291/175/GCA_022291175.1_ASM2229117v1 | ||
| CDS | 2413 | ||
| Genes | 2528 | ||
| mRNA | 2528 | ||
| misc RNA | 49 | ||
| rRNA | 3 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.64 % | ||
| CheckM Completeness | 99.12 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2229117v1 |
| GenBank Assembly Accession | GCA_022291175.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022291175.1 [NCBI] |
| BioSample | SAMN14279051 [NCBI] |
| BioProject | PRJNA609981 [NCBI] |
| Submitter | UFMG |
| Submission Date | 2020-03-04T07:52:08.033 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAANHL01 |
| NCBI TaxID | 1292 |
| Isolation Source | dairy goats with persistent mastitis after therapy with enrofloxacin |
| Geo Location | Brazil:Vicosa |
