Genome Meta Information: Fusobacterium nucleatum_sensu_stricto Fn10-CTX3 (GCA_022340145.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022340145.1 | ||
| HOMD Taxon-ID | HMT-0698 | ||
| Species Name (in use by HOMD) | Fusobacterium nucleatum_sensu_stricto | ||
| Organism Name (as deposited) | HMT-698 Fusobacterium nucleatum_sensu_stricto Fn10-CTX3 | ||
| Strain or Isolate | Fn10-CTX3 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium nucleatum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 35 | ||
| Contigs |
|
||
| Total Sequence Length | 2,101,367 (bp) | ||
| GC Percentage | 26.86 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/340/145/GCA_022340145.1_ASM2234014v1 | ||
| CDS | 1973 | ||
| Genes | 2017 | ||
| mRNA | 2017 | ||
| misc RNA | 17 | ||
| rRNA | 2 | ||
| tRNA | 24 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.86 % | ||
| CheckM Completeness | 95.86 % | ||
| CheckM Contamination | 0.32 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2234014v1 |
| GenBank Assembly Accession | GCA_022340145.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022340145.1 [NCBI] |
| BioSample | SAMN20819805 [NCBI] |
| BioProject | PRJNA755318 [NCBI] |
| Submitter | Resphera Biosciences |
| Submission Date | 2021-08-16T20:19:46.573 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAIMZH01 |
| NCBI TaxID | 851 |
| Isolation Source | tissue |
| Geo Location | missing |
