Genome Meta Information: Pseudomonas luteola ACRSF (GCA_022346805.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022346805.1 | ||
| HOMD Taxon-ID | HMT-0344 | ||
| Species Name (in use by HOMD) | Pseudomonas luteola | ||
| Organism Name (as deposited) | HMT-344 Pseudomonas luteola ACRSF | ||
| Strain or Isolate | ACRSF | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_B; s__Pseudomonas_B luteola |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 90 | ||
| Contigs |
|
||
| Total Sequence Length | 4,707,544 (bp) | ||
| GC Percentage | 55.37 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/346/805/GCA_022346805.1_ASM2234680v1 | ||
| CDS | 4442 | ||
| Genes | 4559 | ||
| mRNA | 4559 | ||
| misc RNA | 54 | ||
| rRNA | 6 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.16 % | ||
| CheckM Completeness | 97.28 % | ||
| CheckM Contamination | 1.81 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2234680v1 |
| GenBank Assembly Accession | GCA_022346805.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022346805.1 [NCBI] |
| BioSample | SAMN17729935 [NCBI] |
| BioProject | PRJNA694925 [NCBI] |
| Submitter | NHGRI/NIH |
| Submission Date | 2021-02-01T14:55:16.860 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAKREJ01 |
| NCBI TaxID | 47886 |
| Isolation Source | skin |
| Geo Location | USA |
