Genome Meta Information: Proteus mirabilis SWHIN_109 (GCA_022354605.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022354605.1 | ||
| HOMD Taxon-ID | HMT-0676 | ||
| Species Name (in use by HOMD) | Proteus mirabilis | ||
| Organism Name (as deposited) | HMT-676 Proteus mirabilis SWHIN_109 | ||
| Strain or Isolate | SWHIN_109 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Proteus; s__Proteus mirabilis |
||
| Sequencing Technology | Illumina; Oxford Nanopore GridION | ||
| Genome Coverage | 200 | ||
| Contigs |
|
||
| Total Sequence Length | 4,000,636 (bp) | ||
| GC Percentage | 39.09 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/354/605/GCA_022354605.1_ASM2235460v1 | ||
| CDS | 3545 | ||
| Genes | 3726 | ||
| mRNA | 3726 | ||
| misc RNA | 74 | ||
| rRNA | 22 | ||
| tRNA | 84 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.16 % | ||
| CheckM Completeness | 95.72 % | ||
| CheckM Contamination | 2.71 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2235460v1 |
| GenBank Assembly Accession | GCA_022354605.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022354605.1 [NCBI] |
| BioSample | SAMN13925601 [NCBI] |
| BioProject | PRJNA603241 [NCBI] |
| Submitter | The University of Hong Kong |
| Submission Date | 2020-01-26T21:10:06.886 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 584 |
| Isolation Source | Shek Wu Hui WWTPs_109 WWTPs influent |
| Geo Location | Hong Kong |
