Genome Meta Information: Nanosynbacter sp. HMT-352 TM7-087 (GCA_022828365.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022828365.1 | ||
| HOMD Taxon-ID | HMT-0352 | ||
| Species Name (in use by HOMD) | Nanosynbacter sp. HMT-352 | ||
| Organism Name (as deposited) | HMT-352 Nanosynbacter sp. HMT-352 TM7-087 | ||
| Strain or Isolate | TM7-087 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__Nanosynbacteraceae;g__Nanosynbacter; s__Nanosynbacter sp022828365 |
||
| Sequencing Technology | Illumina Novaseq | ||
| Genome Coverage | 2735.61 | ||
| Contigs |
|
||
| Total Sequence Length | 741,912 (bp) | ||
| GC Percentage | 43.39 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/828/365/GCA_022828365.1_ASM2282836v1 | ||
| CDS | 759 | ||
| Genes | 811 | ||
| mRNA | 811 | ||
| misc RNA | 5 | ||
| rRNA | 3 | ||
| tRNA | 44 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 89.66 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2282836v1 |
| GenBank Assembly Accession | GCA_022828365.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022828365.1 [NCBI] |
| BioSample | SAMN23492219 [NCBI] |
| BioProject | PRJNA784561 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2021-11-29T13:37:04.110 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAJQJU01 |
| NCBI TaxID | 2902631 |
| Isolation Source | saliva |
| Geo Location | USA:Massachusetts,Boston,The F |
