Genome Meta Information: Desulfovibrio fairfieldensis CE91-St38 (GCA_022834915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022834915.1 | ||
| HOMD Taxon-ID | HMT-0605 | ||
| Species Name (in use by HOMD) | Desulfovibrio fairfieldensis | ||
| Organism Name (as deposited) | HMT-605 Desulfovibrio fairfieldensis CE91-St38 | ||
| Strain or Isolate | CE91-St38 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio; s__Desulfovibrio fairfieldensis_A |
||
| Sequencing Technology | Illumina MiSeq; PacBio Sequel | ||
| Genome Coverage | 617 | ||
| Contigs |
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| Total Sequence Length | 3,458,893 (bp) | ||
| GC Percentage | 61.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/834/915/GCA_022834915.1_ASM2283491v1 | ||
| CDS | 2887 | ||
| Genes | 2973 | ||
| mRNA | 2973 | ||
| misc RNA | 21 | ||
| rRNA | 9 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2283491v1 |
| GenBank Assembly Accession | GCA_022834915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMD00389854 [NCBI] |
| BioProject | PRJDB11902 [NCBI] |
| Submitter | Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN |
| Submission Date | 2021-07-08T13:06:52.370 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | BQNH01 |
| NCBI TaxID | 2049043 |
| Isolation Source | |
| Geo Location | Japan |
