Genome Meta Information: Neisseria meningitidis PartJ-Nmeningitidis-RM8376 (GCA_022869645.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022869645.1 | ||
| HOMD Taxon-ID | HMT-0669 | ||
| Species Name (in use by HOMD) | Neisseria meningitidis | ||
| Organism Name (as deposited) | HMT-669 Neisseria meningitidis PartJ-Nmeningitidis-RM8376 | ||
| Strain or Isolate | PartJ-Nmeningitidis-RM8376 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria meningitidis |
||
| Sequencing Technology | Illumina; PacBio | ||
| Genome Coverage | 1750 | ||
| Contigs |
|
||
| Total Sequence Length | 2,181,327 (bp) | ||
| GC Percentage | 51.89 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/869/645/GCA_022869645.1_ASM2286964v1 | ||
| CDS | 2058 | ||
| Genes | 2168 | ||
| mRNA | 2168 | ||
| misc RNA | 37 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.96 % | ||
| CheckM Completeness | 98.76 % | ||
| CheckM Contamination | 0.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2286964v1 |
| GenBank Assembly Accession | GCA_022869645.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022869645.1 [NCBI] |
| BioSample | SAMN14078801 [NCBI] |
| BioProject | PRJNA605254 [NCBI] |
| Submitter | National Institute of Advanced Industrial Science and Technology, Biomedical Research Institute |
| Submission Date | 2020-02-10T11:24:04.713 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 487 |
| Isolation Source | missing |
| Geo Location | missing |
